C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NACHT and WD repeat domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438489 NWD1-003 ENSG00000188039 9606 + 19:16731195-16816726 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaTestisENST00000438489
Transcript ID Brain Colon Ovary Placenta Testis
ENST00000438489 0.713±0.36 0.045±0.00 0.470±0.46 0.010±0.00 0.656±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G1 CIL_0006G1_0001 CGP 19:16661127-16817963
CIL_0006G2 CIL_0006G2_0001 CGP 19:16719976-16880353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093427 Nwd1-201 protein_coding Mus_musculus 0 3022
ENSMUST00000163026 Nwd1-004 protein_coding Mus_musculus 0 2822
ENSMUST00000160443 Nwd1-007 nonsense_mediated_decay Mus_musculus 0 2654
ENSMUST00000160912 Nwd1-005 protein_coding Mus_musculus 0 2351
ENSMUST00000161254 Nwd1-002 protein_coding Mus_musculus 0 2187
ENSMUST00000161557 Nwd1-001 nonsense_mediated_decay Mus_musculus 0 2183
ENSMUST00000161386 Nwd1-003 protein_coding Mus_musculus 0 1875

Loading