C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438808 RP5-934G17.6-001 ENSG00000224904 9606 + 1:11877770-11880406 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLungMuscleOvaryTestisENST00000438808
Transcript ID Adrenal Brain Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000438808 0.020±0.00 0.012±0.00 0.010±0.00 0.048±0.00 0.054±0.00 0.021±0.00 0.113±0.07 0.012±0.00 0.075±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0001 VISTA 1:11580820-12184055

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144585 Sbf1-003 protein_coding Mus_musculus 0 2158
ENSMUST00000123791 Sbf1-001 protein_coding Mus_musculus 0 1472
ENSMUST00000124576 Sbf1-002 nonsense_mediated_decay Mus_musculus 0 1400
ENSMUST00000124398 Sbf1-009 retained_intron Mus_musculus 0 588
ENSMUST00000175778 Sbf1-011 protein_coding Mus_musculus 0 435
ENSMUST00000177388 Sbf1-013 retained_intron Mus_musculus 0 363

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