C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ACTR3 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439585 ACTR3P2-001 ENSG00000232267 9606 + X:68771322-68772578 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyENST00000439585
Transcript ID Adipose Brain Breast Colon Kidney
ENST00000439585 0.017±0.00 0.008±0.00 0.032±0.00 0.007±0.00 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U1 CIL_0001U1_0001 CGP X:68647666-68842147

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027579 Actr3-201 protein_coding Mus_musculus 0 1363
ENSMUST00000178474 Actr3-001 protein_coding Mus_musculus 0 1363
ENSMUST00000118948 Gm8822-001 processed_pseudogene Mus_musculus 0 1310
ENSMUST00000191578 Actr3-011 nonsense_mediated_decay Mus_musculus 0 1125
ENSMUST00000188497 Actr3-002 protein_coding Mus_musculus 0 749
ENSMUST00000191544 Actr3-004 protein_coding Mus_musculus 0 654
ENSMUST00000187460 Actr3-003 protein_coding Mus_musculus 0 555
ENSMUST00000191004 Actr3-008 protein_coding Mus_musculus 0 507
ENSMUST00000186008 Actr3-006 retained_intron Mus_musculus 0 466
ENSMUST00000189192 Actr3-009 retained_intron Mus_musculus 0 418
ENSMUST00000185280 Actr3-007 protein_coding Mus_musculus 0 309
ENSMUST00000128586 Gm15899-001 processed_pseudogene Mus_musculus 0 272

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