C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001U1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130052-ENSG00000090776 CGP 9606 X:68647666-68842147
GeneTranscriptPositionBiotype
ENSG00000090776 (EFNB1)
ephrin-B1
ENST00000204961 (EFNB1-001) 68828997-68842147 protein_coding
ENSG00000130052 (STARD8)
StAR-related lipid transfer (START) domain containing 8
ENST00000252336 (STARD8-201) 68647669-68725840 protein_coding
ENST00000374597 (STARD8-003) 68693651-68725833 protein_coding
ENST00000374599 (STARD8-004) 68647768-68725836 protein_coding
ENST00000488088 (STARD8-002) 68647666-68656551 processed_transcript
ENST00000523864 (STARD8-001) 68647669-68725842 nonsense_mediated_decay
ENSG00000213740 (SERBP1P1)
SERPINE1 mRNA binding protein 1 pseudogene 1
ENST00000396021 (SERBP1P1-001) 68783472-68785066 processed_pseudogene
ENSG00000232267 (ACTR3P2)
ACTR3 pseudogene 2
ENST00000439585 (ACTR3P2-001) 68771322-68772578 processed_pseudogene
CIL_0001U1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031216-ENSMUSG00000031217 CGP 10090 X:99003248-99148991
GeneTranscriptPositionBiotype
ENSMUSG00000031216 (Stard8)
START domain containing 8
ENSMUST00000036606 (Stard8-001) 99042581-99074728 protein_coding
ENSMUST00000127361 (Stard8-004) 99068608-99070444 processed_transcript
ENSMUST00000145820 (Stard8-003) 99043984-99065823 processed_transcript
ENSMUST00000149999 (Stard8-002) 99003248-99065672 protein_coding
ENSMUSG00000031217 (Efnb1)
ephrin B1
ENSMUST00000052839 (Efnb1-001) 99136130-99148991 protein_coding
ENSMUST00000151750 (Efnb1-002) 99138131-99147230 processed_transcript
ENSMUSG00000083310 (Gm5760)
predicted gene 5760
ENSMUST00000119692 (Gm5760-001) 99081401-99082402 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001U1_0001ENSG00000090776ENST00000204961ENSG00000130052ENST00000252336ENST00000374597ENST00000374599ENST00000488088ENST00000523864ENSG00000213740ENST00000396021ENSG00000232267ENST00000439585CIL_0001U1_0002ENSMUSG00000031216ENSMUST00000036606ENSMUST00000127361ENSMUST00000145820ENSMUST00000149999ENSMUSG00000031217ENSMUST00000052839ENSMUST00000151750ENSMUSG00000083310ENSMUST00000119692
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001U1_0001ENSG00000090776ENST00000204961ENSG00000130052ENST00000252336ENST00000374597ENST00000374599ENST00000488088ENSG00000213740ENST00000396021ENSG00000232267ENST00000439585CIL_0001U1_0002ENSMUSG00000031216ENSMUST00000036606ENSMUST00000149999ENSMUSG00000031217ENSMUST00000052839ENSMUST00000151750ENSMUSG00000083310ENSMUST00000119692
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090776 ENST00000204961 95.179±0.00 8.522±0.00 0.611±0.00 1.738±1.14 10.685±8.30 8.854±6.47 3.795±2.37 13.389±12.61 3.338±0.06 16.388±12.65 1.268±0.87 15.953±9.31 40.758±4.91 6.777±1.86
ENSG00000130052 ENST00000252336 N/A N/A N/A N/A 0.646±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374597 6.414±0.00 5.535±0.00 0.623±0.00 2.257±0.00 1.391±0.00 1.319±0.73 2.895±2.60 4.924±3.60 1.149±0.26 4.873±3.47 0.485±0.05 1.096±0.66 5.529±1.88 0.725±0.48
ENST00000374599 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.718±0.00 N/A 0.275±0.00 1.475±0.00 N/A
ENST00000488088 N/A N/A N/A 2.802±0.00 1.542±0.00 0.860±0.00 0.401±0.00 N/A 1.341±0.00 N/A 0.374±0.11 0.577±0.00 N/A 2.116±0.62
ENST00000523864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213740 ENST00000396021 0.120±0.00 0.043±0.00 N/A 0.024±0.01 0.089±0.00 0.122±0.00 0.027±0.00 0.138±0.00 0.014±0.00 0.137±0.00 0.066±0.00 0.174±0.18 0.072±0.02 0.128±0.01
ENSG00000232267 ENST00000439585 0.017±0.00 N/A N/A 0.008±0.00 0.032±0.00 0.007±0.00 N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031216 ENSMUST00000036606 9.093±2.88 5.142±1.54 5.045±0.63 1.145±0.25 4.628±2.27 2.644±0.39 7.795±1.56 23.586±2.83 1.765±0.65 29.128±6.75 3.377±0.64 3.469±1.56 17.405±13.05 0.978±0.84
ENSMUST00000127361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149999 N/A 27.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031217 ENSMUST00000052839 14.863±0.93 14.964±3.16 10.840±0.89 15.689±10.74 8.242±3.45 31.919±5.69 5.113±0.07 10.373±1.57 3.428±0.41 48.486±14.20 2.242±0.43 26.245±8.42 25.820±12.06 3.269±1.31
ENSMUST00000151750 N/A N/A N/A 7.142±0.00 3.353±0.00 N/A N/A N/A N/A N/A N/A 29.025±25.36 77.181±31.04 6.340±0.00
ENSMUSG00000083310 ENSMUST00000119692 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A 0.014±0.00 N/A N/A N/A 0.020±0.00 N/A

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