C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkB, alkylation repair homolog 2 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440112 ALKBH2-003 ENSG00000189046 9606 - 12:109088222-109092789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisENST00000440112
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000440112 4.710±0.00 3.826±0.00 4.094±0.00 4.871±0.00 1.991±0.00 0.861±0.00 4.141±0.00 5.227±0.08 2.442±0.76 3.316±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VU CIL_0001VU_0001 CGP 12:109023089-109093631
CIL_0001VT CIL_0001VT_0001 CGP 12:109088188-109110992

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0006307 IDA DNA dealkylation involved in DNA repair
GO:0008198 IDA ferrous iron binding
GO:0035511 IDA oxidative DNA demethylation
GO:0043734 IDA DNA-N1-methyladenine dioxygenase activity
GO:0051747 IDA cytosine C-5 DNA demethylase activity
GO:0070989 TAS oxidative demethylation
GO:0080111 TAS DNA demethylation

Homologs

No Homologs available.

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