C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441310 PMS1-001 ENSG00000064933 9606 + 2:189784381-189877629 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverMuscleOvaryENST00000441310
Transcript ID Adipose Brain Breast Colon Heart Liver Muscle Ovary
ENST00000441310 1.090±0.00 1.166±0.00 2.201±0.04 1.398±0.14 1.129±0.00 0.759±0.11 0.503±0.19 3.188±0.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003697 IBA single-stranded DNA binding
GO:0005524 IEA ATP binding
GO:0005634 TAS nucleus
GO:0006200 IBA ATP catabolic process
GO:0006298 IBA:IEA mismatch repair
GO:0016887 IBA ATPase activity
GO:0030983 IEA mismatched DNA binding
GO:0032389 IBA MutLalpha complex
GO:0042493 IEA response to drug

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027267 Pms1-001 protein_coding Mus_musculus 0 2276
ENSMUST00000135246 Pms1-002 protein_coding Mus_musculus 0 1478
ENSMUST00000142922 Pms1-003 processed_transcript Mus_musculus 0 468
ENSMUST00000128337 Pms1-006 protein_coding Mus_musculus 0 409
ENSMUST00000133358 Pms1-007 protein_coding Mus_musculus 0 283
ENSMUST00000126590 Pms1-004 protein_coding Mus_musculus 0 259

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