C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paraspeckle component 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442352 PSPC1P1-001 ENSG00000227879 9606 - 13:19201637-19227432 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainOvaryTestisENST00000442352
Transcript ID Adipose Adrenal Brain Ovary Testis
ENST00000442352 0.086±0.00 0.189±0.00 0.024±0.00 0.061±0.01 2.403±2.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022507 Pspc1-001 protein_coding Mus_musculus 0 610
ENSMUST00000163924 Pspc1-002 protein_coding Mus_musculus 0 372
ENSMUST00000168575 Pspc1-003 nonsense_mediated_decay Mus_musculus 0 315
ENSMUST00000168524 Pspc1-004 retained_intron Mus_musculus 4e-30 135

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