C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paraspeckle protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168575 Pspc1-003 ENSMUSG00000021938 10090 - 14:56748858-56777927 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000168575
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000168575 121.535±0.00 130.708±0.00 143.203±88.75 266.714±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000433 CIL_000433_0002 CGP 14:56668248-56778316
CIL_000432 CIL_000432_0002 CGP 14:56722441-56811716

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338910 PSPC1-002 protein_coding Homo_sapiens 0 665
ENST00000427943 PSPC1-004 protein_coding Homo_sapiens 2e-20 104
ENST00000442352 PSPC1P1-001 unprocessed_pseudogene Homo_sapiens 0 315
ENST00000471658 PSPC1-001 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000492741 PSPC1-005 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000619300 PSPC1-201 protein_coding Homo_sapiens 0 665

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