C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS protein family homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442898 WASH1-001 ENSG00000181404 9606 - 9:14521-29739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000442898
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000442898 0.390±0.00 1.064±0.00 0.629±0.03 0.574±0.00 0.856±0.00 0.304±0.00 1.410±0.00 0.620±0.00 1.934±0.00 1.461±0.06 1.435±0.95 2.361±1.41 3.028±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AF CIL_0009AF_0001 VISTA 9:-140343-460780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005769 ISS early endosome
GO:0016020 IEA membrane
GO:0016197 ISS endosomal transport
GO:0031625 IPI ubiquitin protein ligase binding
GO:0034314 ISS Arp2/3 complex-mediated actin nucleation
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0043014 IDA alpha-tubulin binding
GO:0055037 ISS recycling endosome
GO:0071203 IDA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116556 Wash-202 protein_coding Mus_musculus 0 1153
ENSMUST00000072383 Wash-201 protein_coding Mus_musculus 0 1151

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