C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | opsin 1 (cone pigments), long-wave-sensitive | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000442922  |
OPN1LW-002 |
ENSG00000102076 |
9606 | + |
X:154152942-154159023  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001LD | CIL_0001LD_0001 | CGP | X:154021573-154159032 |
| CIL_0007GD | CIL_0007GD_0002 | CGP | X:154144224-154196135 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004930 | IEA | G-protein coupled receptor activity |
| GO:0007186 | IEA | G-protein coupled receptor signaling pathway |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000127445
|
Opn1mw-006 | protein_coding | Mus_musculus | 0 | 638 |
|
ENSMUST00000101457
|
Opn1mw-002 | protein_coding | Mus_musculus | 0 | 503 |
|
ENSMUST00000033771
|
Opn1mw-001 | protein_coding | Mus_musculus | 0 | 503 |
|
ENSMUST00000145443
|
Opn1mw-004 | processed_transcript | Mus_musculus | 0 | 300 |
|
ENSMUST00000123401
|
Opn1mw-005 | processed_transcript | Mus_musculus | 0 | 230 |
|
ENSMUST00000135307
|
Opn1mw-003 | processed_transcript | Mus_musculus | 0 | 230 |
