C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001LD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169057-ENSG00000102076 CGP 9606 X:154021573-154159032
GeneTranscriptPositionBiotype
ENSG00000169057 (MECP2)
methyl CpG binding protein 2 		ENST00000303391 (MECP2-001) 154021573-154097755 protein_coding
ENST00000369957 (MECP2-003) 154031370-154097663 nonsense_mediated_decay
ENST00000407218 (MECP2-005) 154031013-154097691 protein_coding
ENST00000415944 (MECP2-008) 154032434-154096978 protein_coding
ENST00000453960 (MECP2-002) 154030234-154097720 protein_coding
ENST00000460227 (MECP2-012) 154032434-154049481 processed_transcript
ENST00000463644 (MECP2-011) 154032434-154049481 processed_transcript
ENST00000481807 (MECP2-013) 154032434-154040103 processed_transcript
ENST00000486506 (MECP2-004) 154031269-154057770 processed_transcript
ENST00000488293 (MECP2-010) 154032435-154049481 processed_transcript
ENST00000496908 (MECP2-006) 154032373-154096978 processed_transcript
ENST00000611468 (MECP2-201) 154031307-154092293 protein_coding
ENST00000619732 (MECP2-202) 154021813-154097731 protein_coding
ENST00000622433 (MECP2-203) 154030839-154092293 protein_coding
CIL_0001LD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031393-ENSMUSG00000031394 CGP 10090 X:74026592-74150760
GeneTranscriptPositionBiotype
ENSMUSG00000031393 (Mecp2)
methyl CpG binding protein 2 		ENSMUST00000033770 (Mecp2-002) 74035288-74085690 protein_coding
ENSMUST00000100750 (Mecp2-001) 74026592-74085638 protein_coding
ENSMUST00000123362 (Mecp2-003) 74035289-74085609 protein_coding
ENSMUST00000140399 (Mecp2-004) 74035670-74085609 protein_coding
ENSMUST00000170481 (Mecp2-201) 74026828-74135363 protein_coding
ENSMUSG00000031394 (Opn1mw)
opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) 		ENSMUST00000033771 (Opn1mw-001) 74127464-74150760 protein_coding
ENSMUST00000101457 (Opn1mw-002) 74127466-74150751 protein_coding
ENSMUST00000123401 (Opn1mw-005) 74137903-74150756 processed_transcript
ENSMUST00000127445 (Opn1mw-006) 74138421-74150756 protein_coding
ENSMUST00000135307 (Opn1mw-003) 74127481-74143549 processed_transcript
ENSMUST00000145443 (Opn1mw-004) 74137924-74139866 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LD_0001ENSG00000169057ENST00000303391ENST00000369957ENST00000407218ENST00000415944ENST00000453960ENST00000460227ENST00000463644ENST00000481807ENST00000486506ENST00000488293ENST00000496908ENST00000611468ENST00000619732ENST00000622433CIL_0001LD_0002ENSMUSG00000031393ENSMUST00000033770ENSMUST00000100750ENSMUST00000123362ENSMUST00000140399ENSMUST00000170481ENSMUSG00000031394ENSMUST00000033771ENSMUST00000101457ENSMUST00000123401ENSMUST00000127445ENSMUST00000135307ENSMUST00000145443
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LD_0001ENSG00000169057ENST00000303391ENST00000453960ENST00000619732CIL_0001LD_0002ENSMUSG00000031393ENSMUST00000033770ENSMUST00000100750ENSMUST00000123362ENSMUST00000170481ENSMUSG00000031394ENSMUST00000033771ENSMUST00000101457ENSMUST00000123401ENSMUST00000127445ENSMUST00000135307ENSMUST00000145443
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169057 ENST00000303391 1.882±0.00 2.826±0.00 N/A 2.914±1.38 0.978±0.00 0.677±0.37 0.777±0.00 0.717±0.00 0.477±0.00 N/A 0.428±0.00 4.521±2.81 0.332±0.00 2.632±0.00
ENST00000369957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000407218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453960 N/A N/A 3.681±0.00 1.278±0.00 1.877±0.00 6.629±5.31 1.610±0.00 1.969±0.00 2.911±0.64 14.459±12.59 10.389±6.87 6.906±0.00 5.713±0.74 N/A
ENST00000460227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619732 7.396±0.00 8.605±0.00 N/A 3.485±2.33 2.719±1.04 2.858±2.02 2.400±1.40 2.758±2.20 1.433±0.68 2.666±1.19 1.696±1.20 3.613±2.50 1.306±0.38 4.280±0.00
ENST00000622433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031393 ENSMUST00000033770 N/A N/A N/A N/A N/A 1.059±0.00 N/A N/A 1.467±0.34 N/A N/A N/A 2.376±0.82 0.233±0.01
ENSMUST00000100750 1.084±0.52 1.616±0.93 1.160±0.23 3.266±1.23 1.178±0.52 1.514±0.53 0.725±0.00 0.538±0.11 0.888±0.37 2.095±0.39 1.767±0.48 1.822±1.03 0.554±0.29 0.202±0.13
ENSMUST00000123362 N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A 0.754±0.16 N/A N/A N/A N/A N/A
ENSMUST00000140399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170481 3.095±2.14 2.218±0.70 1.053±0.13 4.409±0.74 2.681±1.22 1.492±0.12 2.247±0.20 3.283±0.42 0.866±0.15 2.196±1.00 2.303±0.32 3.055±1.27 0.791±0.22 0.210±0.11
ENSMUSG00000031394 ENSMUST00000033771 N/A N/A 0.011±0.00 0.030±0.03 0.183±0.08 N/A 0.011±0.00 0.026±0.01 0.008±0.00 N/A 0.117±0.06 N/A 0.013±0.00 N/A
ENSMUST00000101457 N/A N/A 0.003±0.00 0.001±0.00 N/A N/A 0.011±0.00 0.003±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000123401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.03 N/A N/A N/A
ENSMUST00000127445 N/A N/A N/A N/A 0.321±0.16 N/A N/A N/A N/A N/A 0.201±0.10 0.257±0.00 0.236±0.13 N/A
ENSMUST00000135307 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.03 N/A 0.356±0.35 N/A
ENSMUST00000145443 N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A 0.170±0.07 N/A N/A N/A

Loading