C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRAF pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445336 BRAFP1-001 ENSG00000224775 9606 + X:75582676-75585506 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryTestisENST00000445336
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Testis
ENST00000445336 0.021±0.00 0.041±0.00 0.219±0.00 0.021±0.00 0.062±0.02 0.026±0.00 0.057±0.00 0.119±0.11 0.158±0.11 0.051±0.06 0.043±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Y9 CIL_0001Y9_0001 CGP X:75368427-75785236

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101497 Braf-002 protein_coding Mus_musculus 0 2643
ENSMUST00000002487 Braf-001 protein_coding Mus_musculus 0 1426
ENSMUST00000169647 Braf-005 retained_intron Mus_musculus 0 610
ENSMUST00000167073 Braf-003 retained_intron Mus_musculus 0 255

Loading