C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trophinin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445561 TRO-001 ENSG00000067445 9606 + X:54920816-54931431 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLungOvaryPlacentaTestisENST00000445561
Transcript ID Adrenal Brain Colon Heart Lung Ovary Placenta Testis
ENST00000445561 0.469±0.00 3.157±0.69 0.180±0.00 0.270±0.00 0.727±0.00 4.752±4.01 0.815±0.15 0.543±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112709 Tro-201 protein_coding Mus_musculus 0 1253
ENSMUST00000087253 Tro-002 protein_coding Mus_musculus 0 1253
ENSMUST00000151403 Tro-005 protein_coding Mus_musculus 0 1253
ENSMUST00000087258 Tro-001 protein_coding Mus_musculus 0 1253
ENSMUST00000163969 Tro-006 protein_coding Mus_musculus 0 1122
ENSMUST00000163450 Tro-003 nonsense_mediated_decay Mus_musculus 0 990
ENSMUST00000164071 Tro-004 protein_coding Mus_musculus 0 990
ENSMUST00000169450 Tro-008 retained_intron Mus_musculus 0 545
ENSMUST00000112697 Maged2-201 protein_coding Mus_musculus 0 523
ENSMUST00000026302 Maged2-011 protein_coding Mus_musculus 0 523
ENSMUST00000112700 Maged2-002 protein_coding Mus_musculus 0 523
ENSMUST00000112699 Maged2-001 protein_coding Mus_musculus 0 523
ENSMUST00000145342 Maged2-004 retained_intron Mus_musculus 0 346
ENSMUST00000165192 Tro-009 retained_intron Mus_musculus 0 281
ENSMUST00000148604 Tro-010 protein_coding Mus_musculus 0 279
ENSMUST00000171775 Tro-007 retained_intron Mus_musculus 0 207

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