C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding motif protein 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446108 RBM17-201 ENSG00000134453 9606 + 10:6089346-6117457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000446108
Transcript ID Brain
ENST00000446108 0.606±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000380 IMP alternative mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040314 Rbm17-001 protein_coding Mus_musculus 0 1637
ENSMUST00000150369 Rbm17-005 processed_transcript Mus_musculus 0 527
ENSMUST00000156469 Rbm17-003 protein_coding Mus_musculus 0 459
ENSMUST00000125808 Rbm17-006 processed_transcript Mus_musculus 0 364

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