C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L39 pseudogene 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447779 RPL39P29-001 ENSG00000236860 9606 - 13:102263046-102263202 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WJ CIL_0000WJ_0001 CGP 13:101452593-102402457

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121292 Rpl39l-002 protein_coding Mus_musculus 3e-30 134
ENSMUST00000044103 Rpl39l-001 protein_coding Mus_musculus 3e-30 134
ENSMUST00000117602 Gm15148-001 processed_pseudogene Mus_musculus 3e-25 117
ENSMUST00000115231 Rpl39-001 protein_coding Mus_musculus 3e-25 117
ENSMUST00000191066 RP23-127L14.1-001 processed_pseudogene Mus_musculus 1e-24 115
ENSMUST00000142604 Rpl39-ps-002 processed_transcript Mus_musculus 1e-23 111
ENSMUST00000146505 Rpl39-ps-001 transcribed_processed_pseudogene Mus_musculus 5e-23 110
ENSMUST00000119534 Gm15067-001 processed_pseudogene Mus_musculus 7e-22 106
ENSMUST00000121971 Gm12013-001 processed_pseudogene Mus_musculus 2e-21 104
ENSMUST00000118637 Gm11694-001 processed_pseudogene Mus_musculus 8e-21 102
ENSMUST00000118985 Gm14541-001 processed_pseudogene Mus_musculus 3e-20 100
ENSMUST00000138799 Rpl39-002 retained_intron Mus_musculus 7e-17 90

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