C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448165 PPIF-004 ENSG00000108179 9606 + 10:79347658-79354086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLungMusclePlacentaENST00000448165
Transcript ID Adipose Adrenal Brain Breast Lung Muscle Placenta
ENST00000448165 3.212±0.00 7.380±0.00 14.708±0.00 5.670±4.82 4.603±3.81 5.683±0.00 12.896±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PL CIL_0008PL_0001 VISTA 10:78848267-79450832
CIL_0007WJ CIL_0007WJ_0001 VISTA 10:78920559-79524285
CIL_0001G8 CIL_0001G8_0001 CGP 10:79069035-79355337
CIL_0003H9 CIL_0003H9_0001 CGP 10:79347469-79445627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0006457 IEA protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022419 Ppif-001 protein_coding Mus_musculus 0 512
ENSMUST00000125881 Ppif-002 retained_intron Mus_musculus 0 276
ENSDART00000025620 ppiaa-001 protein_coding Danio_rerio 3e-32 143
ENSDART00000123878 ppiaa-002 protein_coding Danio_rerio 1e-30 137
ENSDART00000139986 ppiaa-004 retained_intron Danio_rerio 7e-29 132
ENSDART00000137036 ppiaa-003 retained_intron Danio_rerio 3e-22 110

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