C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase F (cyclophilin F)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125881 Ppif-002 ENSMUSG00000021868 10090 + 14:25694154-25700464 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLungOvaryPlacentaTestisENSMUST00000125881
Transcript ID Adipose Bladder Brain Breast Lung Ovary Placenta Testis
ENSMUST00000125881 0.983±0.05 1.463±0.35 1.697±0.00 2.219±0.08 1.575±0.33 3.180±1.02 0.484±0.26 1.086±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PL CIL_0008PL_0002 VISTA 14:25224623-25826558
CIL_0007WJ CIL_0007WJ_0002 VISTA 14:25284835-25888921
CIL_0001G8 CIL_0001G8_0002 CGP 14:25459185-25700468
CIL_0003H9 CIL_0003H9_0002 CGP 14:25694154-25769039

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225174 PPIF-001 protein_coding Homo_sapiens 0 366
ENST00000394579 PPIF-201 protein_coding Homo_sapiens 0 366
ENST00000448165 PPIF-004 protein_coding Homo_sapiens 0 276
ENST00000472580 PPIF-003 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000492149 PPIF-005 processed_transcript Homo_sapiens 0 372
ENST00000498681 PPIF-002 processed_transcript Homo_sapiens 0 366

Loading