C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cAMP responsive element binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448277 CREB1-011 ENSG00000118260 9606 + 2:207559188-207596949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000448277
Transcript ID Muscle
ENST00000448277 1.338±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YW CIL_0006YW_0001 CGP 2:207074137-207603431
CIL_0006YR CIL_0006YR_0001 CGP 2:207529737-207625928

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087366 Creb1-001 protein_coding Mus_musculus 0 1184
ENSMUST00000171164 Creb1-008 protein_coding Mus_musculus 0 1184
ENSMUST00000185594 Creb1-002 protein_coding Mus_musculus 0 1184
ENSMUST00000187811 Creb1-003 protein_coding Mus_musculus 0 1140
ENSMUST00000190348 Creb1-007 protein_coding Mus_musculus 0 981
ENSMUST00000049932 Creb1-004 protein_coding Mus_musculus 0 981
ENSMUST00000186335 Creb1-005 processed_transcript Mus_musculus 0 905
ENSMUST00000190876 Creb1-006 nonsense_mediated_decay Mus_musculus 0 702
ENSMUST00000188855 Creb1-011 retained_intron Mus_musculus 0 211

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