C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025193 Brd2-001 ENSMUSG00000024335 10090 - 17:34112023-34122317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025193 16.333±6.12 32.923±3.91 8.677±1.66 22.770±2.64 22.269±5.54 22.526±2.91 5.254±1.69 14.266±2.45 7.799±3.03 28.080±1.40 7.716±0.38 21.801±4.97 11.242±3.46 16.164±1.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006334 ISS nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0016568 IEA chromatin modification
GO:0070577 ISS lysine-acetylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374825 BRD2-001 protein_coding Homo_sapiens 0 3838
ENST00000374831 BRD2-002 protein_coding Homo_sapiens 0 3838
ENST00000383108 BRD2-002 protein_coding Homo_sapiens 0 3838
ENST00000395287 BRD2-005 protein_coding Homo_sapiens 0 2459
ENST00000395289 BRD2-201 protein_coding Homo_sapiens 0 3075
ENST00000399527 BRD2-005 protein_coding Homo_sapiens 0 2464
ENST00000399528 BRD2-002 protein_coding Homo_sapiens 0 3855
ENST00000399529 BRD2-001 protein_coding Homo_sapiens 0 3855
ENST00000412535 BRD2-009 protein_coding Homo_sapiens 0 1144
ENST00000414731 BRD2-001 protein_coding Homo_sapiens 0 3849
ENST00000416727 BRD2-001 protein_coding Homo_sapiens 0 3075
ENST00000424160 BRD2-002 protein_coding Homo_sapiens 0 3075
ENST00000425016 BRD2-001 protein_coding Homo_sapiens 0 1227
ENST00000425201 BRD2-005 protein_coding Homo_sapiens 0 2453
ENST00000427021 BRD2-006 protein_coding Homo_sapiens 0 3079
ENST00000429833 BRD2-009 protein_coding Homo_sapiens 0 1144
ENST00000433783 BRD2-009 protein_coding Homo_sapiens 0 1149
ENST00000436979 BRD2-006 protein_coding Homo_sapiens 0 3068
ENST00000438194 BRD2-001 protein_coding Homo_sapiens 0 3838
ENST00000439194 BRD2-006 protein_coding Homo_sapiens 0 3085
ENST00000442219 BRD2-005 protein_coding Homo_sapiens 0 761
ENST00000442863 BRD2-005 protein_coding Homo_sapiens 0 2453
ENST00000446150 BRD2-006 protein_coding Homo_sapiens 0 3068
ENST00000447730 BRD2-002 protein_coding Homo_sapiens 0 1227
ENST00000448067 BRD2-005 protein_coding Homo_sapiens 0 2453
ENST00000449025 BRD2-006 protein_coding Homo_sapiens 0 3073
ENST00000449085 BRD2-202 protein_coding Homo_sapiens 0 3073
ENST00000449118 BRD2-002 protein_coding Homo_sapiens 0 3849
ENST00000450284 BRD2-009 protein_coding Homo_sapiens 0 1155
ENST00000450320 BRD2-005 protein_coding Homo_sapiens 0 2459
ENST00000452539 BRD2-004 protein_coding Homo_sapiens 0 1227
ENST00000454038 BRD2-009 protein_coding Homo_sapiens 0 1144
ENST00000456339 BRD2-009 protein_coding Homo_sapiens 0 1149
ENST00000457933 BRD2-006 protein_coding Homo_sapiens 0 2303
ENST00000460240 BRD2-011 retained_intron Homo_sapiens 0 793
ENST00000460359 BRD2-007 retained_intron Homo_sapiens 0 412
ENST00000461924 BRD2-012 processed_transcript Homo_sapiens 0 732
ENST00000463639 BRD2-013 retained_intron Homo_sapiens 0 590
ENST00000464592 BRD2-011 retained_intron Homo_sapiens 0 793
ENST00000465885 BRD2-011 retained_intron Homo_sapiens 0 324
ENST00000466208 BRD2-012 processed_transcript Homo_sapiens 0 732
ENST00000469015 BRD2-012 processed_transcript Homo_sapiens 2e-17 90
ENST00000469132 BRD2-007 retained_intron Homo_sapiens 0 407
ENST00000471514 BRD2-013 retained_intron Homo_sapiens 0 590
ENST00000474498 BRD2-007 retained_intron Homo_sapiens 0 407
ENST00000474700 BRD2-014 retained_intron Homo_sapiens 0 723
ENST00000477259 BRD2-004 nonsense_mediated_decay Homo_sapiens 0 2678
ENST00000477920 BRD2-004 nonsense_mediated_decay Homo_sapiens 0 1903
ENST00000479568 BRD2-007 retained_intron Homo_sapiens 0 412
ENST00000479699 BRD2-004 nonsense_mediated_decay Homo_sapiens 0 2673
ENST00000479973 BRD2-003 processed_transcript Homo_sapiens 0 2309
ENST00000480141 BRD2-011 retained_intron Homo_sapiens 0 787
ENST00000480700 BRD2-014 retained_intron Homo_sapiens 0 717
ENST00000481259 BRD2-012 nonsense_mediated_decay Homo_sapiens 0 732
ENST00000482036 BRD2-011 retained_intron Homo_sapiens 0 787
ENST00000482105 BRD2-012 processed_transcript Homo_sapiens 0 732
ENST00000482838 BRD2-014 retained_intron Homo_sapiens 0 723
ENST00000482914 BRD2-004 nonsense_mediated_decay Homo_sapiens 0 2673
ENST00000484278 BRD2-013 retained_intron Homo_sapiens 0 590
ENST00000484497 BRD2-014 processed_transcript Homo_sapiens 0 723
ENST00000485239 BRD2-011 retained_intron Homo_sapiens 0 630
ENST00000486112 BRD2-013 retained_intron Homo_sapiens 0 470
ENST00000486864 BRD2-003 nonsense_mediated_decay Homo_sapiens 0 2314
ENST00000488138 BRD2-011 retained_intron Homo_sapiens 0 787
ENST00000488549 BRD2-003 processed_transcript Homo_sapiens 0 2303
ENST00000491751 BRD2-013 retained_intron Homo_sapiens 0 590
ENST00000492172 BRD2-003 nonsense_mediated_decay Homo_sapiens 0 2303
ENST00000492825 BRD2-013 retained_intron Homo_sapiens 0 590
ENST00000493063 BRD2-004 nonsense_mediated_decay Homo_sapiens 0 2667
ENST00000494008 BRD2-003 processed_transcript Homo_sapiens 0 303
ENST00000494471 BRD2-007 retained_intron Homo_sapiens 0 403
ENST00000494637 BRD2-014 retained_intron Homo_sapiens 0 717
ENST00000494846 BRD2-012 processed_transcript Homo_sapiens 0 732
ENST00000495079 BRD2-013 retained_intron Homo_sapiens 0 590
ENST00000495733 BRD2-003 nonsense_mediated_decay Homo_sapiens 0 2303
ENST00000496177 BRD2-012 nonsense_mediated_decay Homo_sapiens 0 732
ENST00000497338 BRD2-007 retained_intron Homo_sapiens 0 407
ENST00000498329 BRD2-014 processed_transcript Homo_sapiens 0 723
ENST00000518754 BRD2-006 protein_coding Homo_sapiens 0 1227
ENST00000547895 BRD2-204 protein_coding Homo_sapiens 0 3075
ENST00000549126 BRD2-206 protein_coding Homo_sapiens 0 3075
ENST00000550142 BRD2-203 protein_coding Homo_sapiens 0 3086
ENST00000550598 BRD2-205 protein_coding Homo_sapiens 0 3081
ENST00000552587 BRD2-207 protein_coding Homo_sapiens 0 3838
ENST00000553146 BRD2-208 protein_coding Homo_sapiens 0 2667
ENST00000607833 BRD2-023 protein_coding Homo_sapiens 0 2636

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