C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PR domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449207 PRDM7-002 ENSG00000126856 9606 - 16:90057780-90075930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000449207
Transcript ID Testis
ENST00000449207 0.316±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0018024 IEA histone-lysine N-methyltransferase activity
GO:0034968 IEA histone lysine methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167994 Prdm9-201 protein_coding Mus_musculus 0 935
ENSMUST00000147532 Prdm9-001 protein_coding Mus_musculus 0 682
ENSMUST00000128267 Prdm9-002 retained_intron Mus_musculus 0 599
ENSMUST00000130297 Prdm9-005 retained_intron Mus_musculus 0 523
ENSMUST00000049861 Rbak-201 protein_coding Mus_musculus 0.000000005 68
ENSMUST00000164068 Rbak-002 protein_coding Mus_musculus 0.000000005 68
ENSMUST00000166382 Rbak-003 protein_coding Mus_musculus 0.000000005 68
ENSMUST00000165318 Rbak-001 protein_coding Mus_musculus 0.000000005 68

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