C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449382 SLC24A5-004 ENSG00000188467 9606 + 15:48121024-48142395 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NB CIL_0004NB_0001 CGP 15:47184101-48142672
CIL_0004QO CIL_0004QO_0002 CGP 15:48120972-48178517

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005802 IDA trans-Golgi network
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006813 IEA potassium ion transport
GO:0006816 IEA calcium ion transport
GO:0008273 IDA calcium, potassium:sodium antiporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0034220 IDA ion transmembrane transport
GO:0035725 IDA sodium ion transmembrane transport
GO:0050896 IEA response to stimulus
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070353 Slc24a5-001 protein_coding Mus_musculus 0 1208
ENSMUST00000067780 Myef2-201 protein_coding Mus_musculus 0 388
ENSMUST00000147105 Myef2-003 protein_coding Mus_musculus 0 388
ENSMUST00000142718 Myef2-005 protein_coding Mus_musculus 0 388
ENSMUST00000129945 Myef2-007 processed_transcript Mus_musculus 0 388
ENSMUST00000149963 Slc24a5-003 retained_intron Mus_musculus 0 315
ENSMUST00000139615 Slc24a5-002 processed_transcript Mus_musculus 0 207

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