C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070353 Slc24a5-001 ENSMUSG00000035183 10090 + 2:125068124-125088677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartOvaryENSMUST00000070353
Transcript ID Colon Heart Ovary
ENSMUST00000070353 0.848±0.00 0.454±0.00 2.238±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NB CIL_0004NB_0002 CGP 2:124089969-125088677
CIL_0004QO CIL_0004QO_0003 CGP 2:125068124-125123661

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005802 ISO trans-Golgi network
GO:0006813 IEA potassium ion transport
GO:0006816 IEA calcium ion transport
GO:0008273 ISO calcium, potassium:sodium antiporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0034220 ISO ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0048022 IMP negative regulation of melanin biosynthetic process
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267836 MYEF2-003 protein_coding Homo_sapiens 0 425
ENST00000324324 MYEF2-001 protein_coding Homo_sapiens 0 425
ENST00000341459 SLC24A5-001 protein_coding Homo_sapiens 0 1509
ENST00000449382 SLC24A5-004 protein_coding Homo_sapiens 0 1208
ENST00000463289 SLC24A5-003 retained_intron Homo_sapiens 0 514
ENST00000558289 MYEF2-005 retained_intron Homo_sapiens 0 425
ENST00000560172 MYEF2-012 protein_coding Homo_sapiens 2e-29 134
ENST00000560530 MYEF2-004 retained_intron Homo_sapiens 0 425
ENST00000620867 MYEF2-203 protein_coding Homo_sapiens 0 425

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