C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449535 GAPDHP52-001 ENSG00000235076 9606 + 13:21358373-21359314 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLungOvaryPlacentaTestisENST00000449535
Transcript ID Adrenal Bladder Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000449535 0.051±0.00 0.151±0.00 0.110±0.00 0.053±0.00 0.049±0.00 0.015±0.00 0.031±0.00 0.062±0.02 0.066±0.02 2.047±1.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MB CIL_0004MB_0001 CGP 13:21176645-21459370

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 2.99878e-43 180
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 6e-40 169

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