C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13296
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117854 Gm13296-001 ENSMUSG00000082314 10090 + 2:11420222-11421236 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryTestisENSMUST00000117854
Transcript ID Liver Muscle Ovary Testis
ENSMUST00000117854 0.010±0.00 0.049±0.00 0.309±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QE CIL_0000QE_0002 CGP 2:11172113-11502101

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 891
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 702
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 887
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 891
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 891
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 438
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 710
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 651
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 717
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 647
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 604
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 811
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 717
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 544
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 496
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 630
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 584
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 617
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 351
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 0 255
ENST00000449535 GAPDHP52-001 processed_pseudogene Homo_sapiens 6e-40 169
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 811
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 422
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 702
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 702
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 451
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 636
ENST00000509132 GAPDHP66-001 processed_pseudogene Homo_sapiens 0 451
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 217
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 684
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 686
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 601
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 660
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 604
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 604
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 446
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 822

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