C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurobeachin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449802 NBEAL1-001 ENSG00000144426 9606 + 2:203014879-203219874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000449802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000449802 0.950±0.00 0.283±0.00 2.477±0.00 0.350±0.09 2.241±1.28 0.602±0.00 1.177±0.33 1.223±0.12 1.811±1.51 4.242±3.05 0.183±0.00 2.289±2.50 0.249±0.11 0.770±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020V CIL_00020V_0001 CGP 2:202912214-203226378
CIL_0001QW CIL_0001QW_0001 CGP 2:203014879-203305840

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160834 Nbeal1-001 protein_coding Mus_musculus 0 9893
ENSMUST00000188450 Nbeal1-005 retained_intron Mus_musculus 0 5217
ENSMUST00000035569 Nbeal1-010 protein_coding Mus_musculus 0 3541
ENSMUST00000162291 Nbeal1-002 nonsense_mediated_decay Mus_musculus 0 2630
ENSMUST00000160980 Nbeal1-003 protein_coding Mus_musculus 0 867
ENSMUST00000159344 Nbeal1-004 protein_coding Mus_musculus 0 765
ENSMUST00000185984 Nbeal1-008 retained_intron Mus_musculus 0 387
ENSMUST00000187195 Nbeal1-006 retained_intron Mus_musculus 5.60519e-45 189
ENSMUST00000190958 Nbeal1-009 retained_intron Mus_musculus 9.99995e-41 174

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