C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144426-ENSG00000119004 CGP 9606 2:203014879-203305840
GeneTranscriptPositionBiotype
ENSG00000119004 (CYP20A1)
cytochrome P450, family 20, subfamily A, polypeptide 1 		ENST00000356079 (CYP20A1-001) 203238940-203297345 protein_coding
ENST00000428265 (CYP20A1-010) 203239021-203280115 nonsense_mediated_decay
ENST00000429815 (CYP20A1-003) 203238982-203297226 protein_coding
ENST00000431118 (CYP20A1-005) 203239027-203298286 nonsense_mediated_decay
ENST00000443941 (CYP20A1-011) 203239035-203285732 protein_coding
ENST00000449301 (CYP20A1-002) 203238977-203297242 nonsense_mediated_decay
ENST00000461371 (CYP20A1-004) 203238982-203297014 processed_transcript
ENST00000463131 (CYP20A1-008) 203239011-203285679 processed_transcript
ENST00000489360 (CYP20A1-009) 203239021-203285732 processed_transcript
ENST00000611416 (CYP20A1-201) 203238449-203305840 protein_coding
ENST00000613925 (CYP20A1-202) 203239009-203305611 protein_coding
ENSG00000144426 (NBEAL1)
neurobeachin-like 1 		ENST00000414576 (NBEAL1-009) 203167310-203217464 protein_coding
ENST00000434469 (NBEAL1-004) 203208635-203226378 protein_coding
ENST00000449802 (NBEAL1-001) 203014879-203219874 protein_coding
ENST00000460355 (NBEAL1-003) 203180956-203191335 retained_intron
ENST00000460416 (NBEAL1-012) 203016365-203050168 retained_intron
ENST00000463830 (NBEAL1-008) 203083499-203085008 retained_intron
ENST00000478884 (NBEAL1-007) 203014925-203062488 processed_transcript
ENST00000483147 (NBEAL1-013) 203083237-203097599 processed_transcript
ENST00000492870 (NBEAL1-006) 203015791-203041857 processed_transcript
ENST00000497505 (NBEAL1-005) 203014879-203086212 retained_intron
ENSG00000202059 (SNORA1)
Small nucleolar RNA SNORA1 		ENST00000365189 (SNORA1.1-203) 203052285-203052418 snoRNA
ENSG00000225124 (AC023271.2)
 ENST00000413895 (AC023271.2-001) 203074685-203075142 processed_pseudogene
ENSG00000232994 (RPL7P14)
ribosomal protein L7 pseudogene 14 		ENST00000449851 (RPL7P14-001) 203040108-203040899 processed_pseudogene
ENSG00000264041 (RN7SL670P)
RNA, 7SL, cytoplasmic 670, pseudogene 		ENST00000577235 (RN7SL670P-201) 203259604-203259897 misc_RNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0001QW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073664-ENSMUSG00000049439 CGP 10090 1:60180599-60388060
GeneTranscriptPositionBiotype
ENSMUSG00000049439 (Cyp20a1)
cytochrome P450, family 20, subfamily a, polypeptide 1 		ENSMUST00000060608 (Cyp20a1-001) 60343323-60388060 protein_coding
ENSMUST00000114202 (Cyp20a1-002) 60343323-60372707 retained_intron
ENSMUST00000148443 (Cyp20a1-003) 60343323-60388060 nonsense_mediated_decay
ENSMUSG00000073664 (Nbeal1)
neurobeachin like 1 		ENSMUST00000035569 (Nbeal1-010) 60260306-60319694 protein_coding
ENSMUST00000159344 (Nbeal1-004) 60278770-60291929 protein_coding
ENSMUST00000160834 (Nbeal1-001) 60180599-60338328 protein_coding
ENSMUST00000160980 (Nbeal1-003) 60222202-60235561 protein_coding
ENSMUST00000162291 (Nbeal1-002) 60260314-60331466 nonsense_mediated_decay
ENSMUST00000185573 (Nbeal1-007) 60227222-60229898 retained_intron
ENSMUST00000185984 (Nbeal1-008) 60266139-60269356 retained_intron
ENSMUST00000187195 (Nbeal1-006) 60180812-60185898 retained_intron
ENSMUST00000188450 (Nbeal1-005) 60235464-60282038 retained_intron
ENSMUST00000190958 (Nbeal1-009) 60283935-60286196 retained_intron

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QW_0001ENSG00000119004ENST00000356079ENST00000428265ENST00000429815ENST00000431118ENST00000443941ENST00000449301ENST00000461371ENST00000463131ENST00000489360ENST00000611416ENST00000613925ENSG00000144426ENST00000414576ENST00000434469ENST00000449802ENST00000460355ENST00000460416ENST00000463830ENST00000478884ENST00000483147ENST00000492870ENST00000497505ENSG00000202059ENST00000365189ENSG00000225124ENST00000413895ENSG00000232994ENST00000449851ENSG00000264041ENST00000577235CIL_0001QW_0002ENSMUSG00000049439ENSMUST00000060608ENSMUST00000114202ENSMUST00000148443ENSMUSG00000073664ENSMUST00000035569ENSMUST00000159344ENSMUST00000160834ENSMUST00000160980ENSMUST00000162291ENSMUST00000185573ENSMUST00000185984ENSMUST00000187195ENSMUST00000188450ENSMUST00000190958
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QW_0001ENSG00000119004ENST00000356079ENST00000428265ENST00000431118ENST00000443941ENST00000449301ENST00000461371ENST00000611416ENST00000613925ENSG00000144426ENST00000414576ENST00000449802ENST00000460355ENST00000497505ENSG00000202059ENST00000365189ENSG00000225124ENST00000413895ENSG00000232994ENST00000449851ENSG00000264041ENST00000577235CIL_0001QW_0002ENSMUSG00000049439ENSMUST00000060608ENSMUST00000114202ENSMUST00000148443ENSMUSG00000073664ENSMUST00000035569ENSMUST00000160834ENSMUST00000187195
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119004 ENST00000356079 N/A N/A N/A N/A N/A 1.397±0.00 N/A 1.602±0.00 2.818±0.00 3.116±0.00 N/A 4.482±0.00 N/A N/A
ENST00000428265 N/A N/A N/A N/A N/A N/A 2.320±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000429815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.332±0.00 2.382±0.00 1.723±0.00
ENST00000443941 N/A N/A 4.363±0.00 N/A N/A 3.991±0.00 N/A 5.630±0.00 N/A 10.217±0.00 2.649±0.00 N/A N/A N/A
ENST00000449301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A
ENST00000461371 N/A N/A N/A N/A 3.801±0.00 N/A 1.702±0.23 3.926±0.36 3.498±1.05 2.288±0.00 N/A 5.395±1.03 2.701±0.22 3.476±0.12
ENST00000463131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611416 N/A 1.746±0.00 N/A N/A 0.515±0.00 0.409±0.00 N/A 1.729±0.00 N/A 0.309±0.00 0.280±0.00 1.287±0.77 0.428±0.00 1.527±0.76
ENST00000613925 N/A N/A 3.528±0.00 N/A N/A 2.386±0.00 N/A N/A N/A N/A N/A 3.892±0.00 N/A N/A
ENSG00000144426 ENST00000414576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00 0.699±0.00 0.369±0.19 1.515±0.00
ENST00000434469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449802 0.950±0.00 0.283±0.00 2.477±0.00 0.350±0.09 2.241±1.28 0.602±0.00 1.177±0.33 1.223±0.12 1.811±1.51 4.242±3.05 0.183±0.00 2.289±2.50 0.249±0.11 0.770±0.03
ENST00000460355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENST00000460416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.701±0.00 N/A N/A
ENSG00000202059 ENST00000365189 0.124±0.00 0.123±0.00 N/A N/A N/A N/A N/A N/A N/A 0.330±0.00 N/A N/A N/A N/A
ENSG00000225124 ENST00000413895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A
ENSG00000232994 ENST00000449851 0.072±0.00 0.057±0.00 0.201±0.00 0.069±0.03 0.781±0.61 0.473±0.44 0.033±0.00 0.019±0.00 0.039±0.02 0.457±0.00 N/A 0.521±0.31 N/A N/A
ENSG00000264041 ENST00000577235 0.255±0.00 1.546±0.00 N/A 0.662±0.00 0.596±0.00 0.365±0.00 0.127±0.00 0.670±0.00 0.058±0.00 0.060±0.00 0.875±0.00 0.602±0.30 N/A 0.598±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049439 ENSMUST00000060608 7.572±0.92 4.104±0.67 11.728±0.08 2.469±1.62 3.164±1.30 3.294±0.79 1.904±0.45 4.722±0.19 6.062±2.59 7.496±0.57 1.112±0.26 4.122±2.65 8.517±3.57 0.464±0.15
ENSMUST00000114202 1.990±0.00 2.057±0.18 N/A 1.094±0.00 2.023±0.67 1.516±0.42 1.504±0.34 N/A N/A N/A 1.600±0.00 2.338±0.73 1.879±0.00 N/A
ENSMUST00000148443 N/A N/A 3.817±0.43 1.572±0.65 0.574±0.00 0.568±0.00 N/A N/A N/A N/A 0.964±0.35 0.895±0.00 N/A 0.178±0.02
ENSMUSG00000073664 ENSMUST00000035569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.922±0.00 N/A N/A
ENSMUST00000159344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160834 1.432±0.58 1.166±0.60 3.186±2.18 0.600±0.22 1.157±0.48 0.573±0.20 1.854±0.63 0.855±0.20 0.233±0.06 3.348±1.20 0.580±0.46 1.391±0.57 0.606±0.31 0.624±0.37
ENSMUST00000160980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.095±0.00 N/A N/A
ENSMUST00000188450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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