C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450136 TRIM32-201 ENSG00000119401 9606 + 9:116687302-116701298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryTestisENST00000450136
Transcript ID Brain Colon Heart Liver Lung Ovary Testis
ENST00000450136 0.882±0.00 0.528±0.10 1.152±0.00 0.166±0.00 0.741±0.00 3.252±0.00 3.989±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FO CIL_0004FO_0001 CGP 9:116153804-117415070
CIL_0004FP CIL_0004FP_0001 CGP 9:116425225-117415070
CIL_0004FM CIL_0004FM_0001 CGP 9:116687302-117716871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0003713 TAS transcription coactivator activity
GO:0003723 ISS RNA binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005863 ISS striated muscle myosin thick filament
GO:0008270 IEA zinc ion binding
GO:0009411 ISS response to UV
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0017022 ISS myosin binding
GO:0030307 IDA positive regulation of cell growth
GO:0030335 IDA positive regulation of cell migration
GO:0030957 TAS Tat protein binding
GO:0031369 ISS translation initiation factor binding
GO:0032479 TAS regulation of type I interferon production
GO:0032481 TAS positive regulation of type I interferon production
GO:0032897 IDA negative regulation of viral transcription
GO:0034612 ISS response to tumor necrosis factor
GO:0042787 IMP protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 IDA ubiquitin binding
GO:0043621 IDA protein self-association
GO:0045087 TAS innate immune response
GO:0045444 ISS fat cell differentiation
GO:0045666 ISS positive regulation of neuron differentiation
GO:0045732 ISS positive regulation of protein catabolic process
GO:0045787 IDA positive regulation of cell cycle
GO:0045862 IDA positive regulation of proteolysis
GO:0046872 IEA metal ion binding
GO:0048147 ISS negative regulation of fibroblast proliferation
GO:0050769 ISS positive regulation of neurogenesis
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 ISS positive regulation of NF-kappaB transcription factor activity
GO:1902187 IDA negative regulation of viral release from host cell
GO:1902230 IDA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000147 ISS positive regulation of cell motility

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050850 Trim32-001 protein_coding Mus_musculus 0 2571
ENSMUST00000107366 Trim32-002 protein_coding Mus_musculus 0 2551
ENSMUST00000156922 Trim32-004 protein_coding Mus_musculus 0 701
ENSMUST00000155978 Trim32-003 protein_coding Mus_musculus 0 560

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