C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450168 LDHD-002 ENSG00000166816 9606 - 16:75111896-75116771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000450168
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000450168 2.087±0.00 4.868±0.00 9.075±8.40 1.459±0.87 11.510±10.33 8.333±2.27 19.153±18.89 0.847±0.00 7.644±1.94 2.380±0.97 1.556±0.00 0.953±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y8 CIL_0004Y8_0002 CGP 16:74999030-75116771
CIL_00048C CIL_00048C_0001 CGP 16:75111860-75172236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004458 IEA D-lactate dehydrogenase (cytochrome) activity
GO:0005515 IPI protein binding
GO:0005739 ISS mitochondrion
GO:0008762 IEA UDP-N-acetylmuramate dehydrogenase activity
GO:0016491 IEA oxidoreductase activity
GO:0016614 IEA oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070004 Ldhd-001 protein_coding Mus_musculus 0 1277
ENSMUST00000173521 Ldhd-003 retained_intron Mus_musculus 0 774
ENSMUST00000173909 Ldhd-002 retained_intron Mus_musculus 4e-34 150

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