C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070004 Ldhd-001 ENSMUSG00000031958 10090 - 8:111626271-111630374 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverMuscleOvaryTestisENSMUST00000070004
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000070004 21.337±8.40 37.203±11.20 24.031±1.73 20.451±2.08 159.004±23.31 79.009±32.98 16.431±1.68 13.939±3.99 1.616±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PH CIL_0002PH_0002 CGP 8:111448784-111626030
CIL_0004Y8 CIL_0004Y8_0003 CGP 8:111536097-111630374
CIL_00048C CIL_00048C_0002 CGP 8:111623785-111671008

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004458 IEA D-lactate dehydrogenase (cytochrome) activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006754 NAS ATP biosynthetic process
GO:0008720 NAS D-lactate dehydrogenase activity
GO:0008762 IEA UDP-N-acetylmuramate dehydrogenase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300051 LDHD-001 protein_coding Homo_sapiens 0 776
ENST00000450168 LDHD-002 protein_coding Homo_sapiens 0 1277

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