C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166816-ENSG00000184517 CGP 9606 16:75111860-75172236
GeneTranscriptPositionBiotype
ENSG00000166816 (LDHD)
lactate dehydrogenase D 		ENST00000300051 (LDHD-001) 75111860-75116767 protein_coding
ENST00000450168 (LDHD-002) 75111896-75116771 protein_coding
ENST00000568164 (LDHD-004) 75114504-75115592 retained_intron
ENST00000569876 (LDHD-003) 75114526-75116755 nonsense_mediated_decay
ENSG00000184517 (ZFP1)
ZFP1 zinc finger protein 		ENST00000332307 (ZFP1-008) 75148534-75170517 protein_coding
ENST00000393430 (ZFP1-001) 75148582-75172236 protein_coding
ENST00000464850 (ZFP1-002) 75148527-75172000 protein_coding
ENST00000563356 (ZFP1-009) 75148494-75169402 processed_transcript
ENST00000564989 (ZFP1-004) 75148510-75149008 processed_transcript
ENST00000566105 (ZFP1-003) 75148494-75149012 processed_transcript
ENST00000567481 (ZFP1-005) 75149051-75169326 protein_coding
ENST00000568079 (ZFP1-007) 75148494-75170470 protein_coding
ENST00000570010 (ZFP1-006) 75148492-75170372 protein_coding
ENSG00000261058 (RP11-252E2.2)
 ENST00000563098 (RP11-252E2.2-001) 75119558-75144200 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00048C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031958-ENSMUSG00000055835 CGP 10090 8:111623785-111671008
GeneTranscriptPositionBiotype
ENSMUSG00000031958 (Ldhd)
lactate dehydrogenase D 		ENSMUST00000070004 (Ldhd-001) 111626271-111630374 protein_coding
ENSMUST00000173521 (Ldhd-003) 111625503-111630335 retained_intron
ENSMUST00000173909 (Ldhd-002) 111623785-111628587 retained_intron
ENSMUSG00000033545 (Znrf1)
zinc and ring finger 1 		ENSMUST00000095176 (Znrf1-002) 111536842-111623778 protein_coding
ENSMUST00000166859 (Znrf1-201) 111538343-111626030 protein_coding
ENSMUST00000168428 (Znrf1-202) 111536640-111626030 protein_coding
ENSMUST00000171182 (Znrf1-203) 111536640-111626030 protein_coding
ENSMUST00000172856 (Znrf1-001) 111536097-111625720 protein_coding
ENSMUST00000173481 (Znrf1-009) 111538465-111609364 processed_transcript
ENSMUST00000173506 (Znrf1-003) 111537120-111622973 protein_coding
ENSMUST00000173692 (Znrf1-006) 111561840-111606796 processed_transcript
ENSMUST00000173726 (Znrf1-012) 111537463-111621936 protein_coding
ENSMUST00000173781 (Znrf1-010) 111541259-111621664 protein_coding
ENSMUST00000173819 (Znrf1-004) 111609296-111621775 protein_coding
ENSMUST00000173922 (Znrf1-011) 111606748-111622962 nonsense_mediated_decay
ENSMUST00000174333 (Znrf1-008) 111538343-111622571 protein_coding
ENSMUST00000174376 (Znrf1-005) 111537487-111622501 nonsense_mediated_decay
ENSMUST00000174454 (Znrf1-007) 111537578-111622602 protein_coding
ENSMUSG00000055835 (Zfp1)
zinc finger protein 1 		ENSMUST00000077791 (Zfp1-201) 111643443-111671008 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048C_0001ENSG00000166816ENST00000300051ENST00000450168ENST00000568164ENST00000569876ENSG00000184517ENST00000332307ENST00000393430ENST00000464850ENST00000563356ENST00000564989ENST00000566105ENST00000567481ENST00000568079ENST00000570010ENSG00000261058ENST00000563098CIL_00048C_0002ENSMUSG00000031958ENSMUST00000070004ENSMUST00000173521ENSMUST00000173909ENSMUSG00000033545ENSMUST00000095176ENSMUST00000166859ENSMUST00000168428ENSMUST00000171182ENSMUST00000172856ENSMUST00000173481ENSMUST00000173506ENSMUST00000173692ENSMUST00000173726ENSMUST00000173781ENSMUST00000173819ENSMUST00000173922ENSMUST00000174333ENSMUST00000174376ENSMUST00000174454ENSMUSG00000055835ENSMUST00000077791
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048C_0001ENSG00000166816ENST00000300051ENST00000450168ENSG00000184517ENST00000332307ENST00000393430ENST00000464850ENST00000567481ENST00000570010ENSG00000261058ENST00000563098CIL_00048C_0002ENSMUSG00000031958ENSMUST00000070004ENSMUST00000173521ENSMUST00000173909ENSMUSG00000033545ENSMUST00000095176ENSMUST00000172856ENSMUST00000173506ENSMUST00000174376ENSMUSG00000055835ENSMUST00000077791
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166816 ENST00000300051 0.399±0.00 1.522±0.00 2.363±0.00 1.582±1.46 N/A 1.213±0.00 4.047±3.71 7.050±0.17 N/A N/A 1.973±0.00 2.951±2.99 1.182±0.30 0.511±0.33
ENST00000450168 2.087±0.00 N/A N/A 4.868±0.00 9.075±8.40 1.459±0.87 11.510±10.33 8.333±2.27 19.153±18.89 0.847±0.00 7.644±1.94 2.380±0.97 1.556±0.00 0.953±0.00
ENST00000568164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184517 ENST00000332307 N/A N/A N/A 2.452±0.00 N/A N/A 0.546±0.00 N/A N/A N/A N/A N/A 0.368±0.00 1.187±0.00
ENST00000393430 0.185±0.00 0.858±0.00 0.718±0.00 2.562±0.71 1.474±0.00 1.115±0.40 0.554±0.32 1.701±0.86 N/A 0.742±0.45 0.217±0.04 0.758±0.45 0.776±0.00 0.391±0.00
ENST00000464850 0.354±0.00 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.096±0.00 N/A 0.234±0.00 N/A
ENST00000563356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.089±0.00
ENST00000568079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570010 0.399±0.00 N/A 0.286±0.00 N/A 1.439±0.00 0.205±0.00 N/A 3.266±0.00 1.487±0.00 0.429±0.00 N/A 0.399±0.00 0.372±0.00 N/A
ENSG00000261058 ENST00000563098 N/A 0.519±0.00 N/A 0.027±0.00 0.251±0.00 0.071±0.00 0.024±0.00 0.732±0.68 0.132±0.00 0.154±0.00 0.022±0.00 0.045±0.00 N/A 0.111±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031958 ENSMUST00000070004 21.337±8.40 37.203±11.20 N/A N/A 24.031±1.73 N/A 20.451±2.08 159.004±23.31 79.009±32.98 N/A 16.431±1.68 13.939±3.99 N/A 1.616±0.00
ENSMUST00000173521 N/A N/A N/A N/A N/A N/A N/A 32.761±2.19 16.610±2.33 N/A N/A N/A N/A N/A
ENSMUST00000173909 7.552±0.93 11.496±2.29 7.206±1.11 19.499±2.84 10.262±0.89 5.191±0.19 6.643±0.23 N/A 1.849±0.32 9.086±0.58 6.257±0.39 13.902±1.88 N/A N/A
ENSMUSG00000033545 ENSMUST00000095176 16.380±5.12 15.857±1.83 17.932±6.71 41.341±25.29 15.440±6.57 7.054±1.77 13.126±5.17 N/A 7.487±3.79 17.187±8.48 14.355±1.04 29.590±10.71 6.922±3.39 12.793±3.75
ENSMUST00000166859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172856 4.867±0.00 7.082±0.00 N/A 7.871±0.00 N/A N/A N/A N/A N/A N/A N/A 7.588±0.00 N/A 5.135±0.00
ENSMUST00000173481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173506 13.984±0.00 29.419±6.39 22.572±5.28 37.164±16.90 27.648±5.32 14.948±3.21 17.464±0.56 N/A 7.225±1.97 17.232±1.23 15.712±1.04 21.350±6.20 10.501±1.23 29.085±13.30
ENSMUST00000173692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.646±0.00
ENSMUST00000174454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000055835 ENSMUST00000077791 2.711±0.84 5.581±0.53 5.105±1.00 7.932±1.33 2.380±1.16 2.285±0.36 1.903±0.38 3.729±0.53 2.580±0.52 2.548±0.72 2.188±0.87 5.129±1.13 5.101±2.52 2.036±0.35

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