C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sideroflexin 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000450185  |
SFXN5-006 |
ENSG00000144040 |
9606 | - |
2:72996512-73071709  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00087O | CIL_00087O_0001 | VISTA | 2:72597601-73198962 |
| CIL_0008RW | CIL_0008RW_0001 | VISTA | 2:72647671-73248640 |
| CIL_0002DU | CIL_0002DU_0002 | CGP | 2:72916260-73075619 |
| CIL_0002DT | CIL_0002DT_0002 | CGP | 2:72942036-73156721 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008324 | IEA | cation transmembrane transporter activity |
| GO:0016020 | IEA | membrane |
| GO:0098655 | IEA | cation transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000059034
|
Sfxn5-003 | protein_coding | Mus_musculus | 0 | 309 |
|
ENSMUST00000045846
|
Sfxn5-001 | protein_coding | Mus_musculus | 0 | 309 |
|
ENSMUST00000148179
|
Sfxn5-007 | processed_transcript | Mus_musculus | 0 | 209 |
|
ENSDART00000144464
|
sfxn5a-001 | protein_coding | Danio_rerio | 9e-23 | 113 |
|
ENSMUST00000173269
|
Neu1-002 | retained_intron | Mus_musculus | 0.00002 | 57 |
