C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family G (with RhoGef domain) member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450733 PLEKHG4-006 ENSG00000196155 9606 + 16:67279589-67289499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryPlacentaENST00000450733
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENST00000450733 0.305±0.00 0.311±0.00 0.029±0.00 0.709±0.00 0.314±0.00 0.007±0.00 0.340±0.00 0.076±0.00 1.809±0.58 0.457±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JZ CIL_0005JZ_0002 CGP 16:67237683-67289499
CIL_00033E CIL_00033E_0001 CGP 16:67277510-67326763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160191 Plekhg4-007 protein_coding Mus_musculus 0 2566
ENSMUST00000014927 Plekhg4-001 protein_coding Mus_musculus 0 2499
ENSMUST00000159286 Plekhg4-002 nonsense_mediated_decay Mus_musculus 0 1886
ENSMUST00000161672 Plekhg4-003 retained_intron Mus_musculus 0 560
ENSDART00000154669 PLEKHG4B (2 of 2)-001 protein_coding Danio_rerio 2e-36 159
ENSDART00000128140 PLEKHG4B (2 of 2)-201 protein_coding Danio_rerio 6e-26 124

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