C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S20 pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451209 RPS20P10-001 ENSG00000233971 9606 - 2:71984182-71984434 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyMuscleOvaryTestisENST00000451209
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Muscle Ovary Testis
ENST00000451209 0.107±0.00 0.346±0.00 0.056±0.00 0.170±0.00 0.105±0.00 0.056±0.00 0.100±0.00 0.676±0.00 0.086±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BT CIL_0003BT_0001 CGP 2:71453722-72148038

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130128 Rps20-003 retained_intron Mus_musculus 0 329
ENSMUST00000103009 Rps20-002 retained_intron Mus_musculus 0 329
ENSMUST00000138502 Rps20-001 protein_coding Mus_musculus 0 329
ENSMUST00000154056 Gm4997-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000120047 Gm11420-001 processed_pseudogene Mus_musculus 4e-21 104

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