C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil alpha-helical rod protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451521 CCHCR1-011 ENSG00000204536 9606 - 6:31142520-31157607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLungTestisENST00000451521
Transcript ID Colon Kidney Lung Testis
ENST00000451521 0.689±0.00 1.683±0.00 0.626±0.00 8.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA:IDA cytoplasm
GO:0005814 IDA centriole
GO:0007275 IEA multicellular organismal development
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173903 Cchcr1-004 protein_coding Mus_musculus 0 1712
ENSMUST00000045956 Cchcr1-001 protein_coding Mus_musculus 0 1635
ENSMUST00000164242 Cchcr1-002 protein_coding Mus_musculus 0 1635
ENSMUST00000173986 Cchcr1-005 processed_transcript Mus_musculus 0 252

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