C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family F (GCN20), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452530 ABCF1-002 ENSG00000236149 9606 + CHR_HSCHR6_MHC_COX_CTG1:30561234-30581268 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005635 IDA nuclear envelope
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006412 TAS translation
GO:0006413 IMP translational initiation
GO:0006954 TAS inflammatory response
GO:0008135 TAS translation factor activity, nucleic acid binding
GO:0008494 IDA translation activator activity
GO:0016020 IDA membrane
GO:0016887 IEA ATPase activity
GO:0042788 IDA polysomal ribosome
GO:0043022 IDA ribosome binding
GO:0044822 IDA poly(A) RNA binding
GO:0045727 IDA positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043757 Abcf1-001 protein_coding Mus_musculus 0 2145
ENSMUST00000173111 Abcf1-006 retained_intron Mus_musculus 0 630
ENSMUST00000087205 Abcf1-005 retained_intron Mus_musculus 0 379
ENSMUST00000173090 Abcf1-007 retained_intron Mus_musculus 0 259
ENSMUST00000173125 Abcf1-008 retained_intron Mus_musculus 8.99634e-43 180

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