C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family F (GCN20), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173111 Abcf1-006 ENSMUSG00000038762 10090 - 17:35957287-35958486 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000173111
Transcript ID Adrenal Colon Ovary
ENSMUST00000173111 12.054±0.59 13.602±1.78 15.828±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326195 ABCF1-001 protein_coding Homo_sapiens 0 636
ENST00000376545 ABCF1-002 protein_coding Homo_sapiens 0 636
ENST00000383587 ABCF1-002 protein_coding Homo_sapiens 0 630
ENST00000383588 ABCF1-001 protein_coding Homo_sapiens 0 630
ENST00000400609 ABCF1-004 protein_coding Homo_sapiens 0 516
ENST00000412443 ABCF1-002 protein_coding Homo_sapiens 0 636
ENST00000416932 ABCF1-004 protein_coding Homo_sapiens 0 516
ENST00000419893 ABCF1-001 protein_coding Homo_sapiens 0 630
ENST00000420257 ABCF1-002 protein_coding Homo_sapiens 0 630
ENST00000421042 ABCF1-002 protein_coding Homo_sapiens 0 636
ENST00000421608 ABCF1-004 protein_coding Homo_sapiens 0 521
ENST00000423247 ABCF1-001 protein_coding Homo_sapiens 0 630
ENST00000426219 ABCF1-001 protein_coding Homo_sapiens 0 636
ENST00000448939 ABCF1-002 protein_coding Homo_sapiens 0 630
ENST00000452530 ABCF1-002 protein_coding Homo_sapiens 0 630
ENST00000454094 ABCF1-004 protein_coding Homo_sapiens 0 521
ENST00000456791 ABCF1-004 protein_coding Homo_sapiens 0 516
ENST00000457078 ABCF1-001 protein_coding Homo_sapiens 0 636
ENST00000457111 ABCF1-001 protein_coding Homo_sapiens 0 630
ENST00000457970 ABCF1-004 protein_coding Homo_sapiens 0 516
ENST00000461877 ABCF1-007 retained_intron Homo_sapiens 0 680
ENST00000470464 ABCF1-005 processed_transcript Homo_sapiens 0 630
ENST00000472245 ABCF1-007 retained_intron Homo_sapiens 0 686
ENST00000475528 ABCF1-005 processed_transcript Homo_sapiens 0 630
ENST00000475993 ABCF1-005 nonsense_mediated_decay Homo_sapiens 0 636
ENST00000479321 ABCF1-007 retained_intron Homo_sapiens 0 680
ENST00000479542 ABCF1-007 retained_intron Homo_sapiens 0 686
ENST00000485585 ABCF1-005 processed_transcript Homo_sapiens 0 630
ENST00000486105 ABCF1-005 processed_transcript Homo_sapiens 0 636
ENST00000490343 ABCF1-007 retained_intron Homo_sapiens 0 680
ENST00000491571 ABCF1-007 retained_intron Homo_sapiens 0 686
ENST00000494321 ABCF1-007 retained_intron Homo_sapiens 0 680
ENST00000494413 ABCF1-005 processed_transcript Homo_sapiens 0 636
ENST00000495194 ABCF1-005 processed_transcript Homo_sapiens 0 630

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