C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 8 pseudogene 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454171 HSPA8P16-001 ENSG00000224059 9606 + 7:85027828-85029692 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverOvaryPlacentaTestisENST00000454171
Transcript ID Adipose Brain Heart Kidney Liver Ovary Placenta Testis
ENST00000454171 0.006±0.00 0.052±0.00 0.027±0.02 0.006±0.00 0.006±0.00 0.043±0.00 0.121±0.00 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PY CIL_0008PY_0001 VISTA 7:84764651-85368525

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 898
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000122434 Gm13437-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 590
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000127699 Hspa8-008 retained_intron Mus_musculus 0 335
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 302
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 302

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