C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455482 HDAC1P1-001 ENSG00000234724 9606 + 10:94137748-94139500 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000455482
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000455482 0.028±0.00 0.120±0.00 0.029±0.00 0.061±0.03 1.812±0.00 0.030±0.01 0.028±0.00 0.642±0.00 0.390±0.00 0.076±0.06 0.116±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067K CIL_00067K_0001 CGP 10:93893973-94332823
CIL_00073K CIL_00073K_0001 CGP 10:93993989-94362959

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079363 Gm10093-201 protein_coding Mus_musculus 0 737
ENSMUST00000102597 Hdac1-001 protein_coding Mus_musculus 0 737
ENSMUST00000142984 Hdac1-005 retained_intron Mus_musculus 0 496
ENSMUST00000116079 Gm7146-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000121066 Gm14524-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000139305 Hdac1-002 retained_intron Mus_musculus 0 198
ENSMUST00000189678 RP24-93I18.5-001 processed_pseudogene Mus_musculus 0 196

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