C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000402644}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455584 RP11-385D13.1-001 ENSG00000251537 9606 - 17:15571491-15651653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonENST00000455584
Transcript ID Bladder Colon
ENST00000455584 0.095±0.00 0.300±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0001 VISTA 17:15144744-15748248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072639 Trim16-004 protein_coding Mus_musculus 0 977
ENSMUST00000055006 Trim16-001 protein_coding Mus_musculus 0 977
ENSMUST00000108703 Trim16-002 protein_coding Mus_musculus 0 966
ENSMUST00000150989 Fbxw10-201 protein_coding Mus_musculus 0 893
ENSMUST00000176577 Fbxw10-001 protein_coding Mus_musculus 0 893
ENSMUST00000177336 Fbxw10-004 nonsense_mediated_decay Mus_musculus 0 893
ENSMUST00000128623 Trim16-005 processed_transcript Mus_musculus 0 710
ENSMUST00000036085 Fbxw10-002 protein_coding Mus_musculus 0 708

Loading