C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein C pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456056 HNRNPCP7-001 ENSG00000228653 9606 + 7:64500825-64501729 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000456056
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000456056 0.249±0.00 1.077±0.00 0.088±0.00 0.641±0.32 0.599±0.00 0.133±0.00 0.358±0.00 0.693±0.00 0.127±0.00 0.311±0.29 0.207±0.04 0.201±0.00 0.079±0.02 0.260±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064B CIL_00064B_0008 CGP 7:64307459-64563106

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164655 Hnrnpc-202 protein_coding Mus_musculus 0 869
ENSMUST00000111610 Hnrnpc-201 protein_coding Mus_musculus 0 869
ENSMUST00000117947 Gm12445-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000122361 Gm12696-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000174284 Gm18889-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000190510 RP24-495G2.1-001 processed_pseudogene Mus_musculus 2e-30 137

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