C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12696
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122361 Gm12696-001 ENSMUSG00000084159 10090 - 4:97521428-97522332 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122361
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122361 5.567±1.81 3.333±0.87 6.553±0.40 15.985±2.57 5.160±1.75 5.758±0.92 5.537±0.35 7.917±1.43 8.593±4.02 6.836±0.40 1.245±0.21 11.347±10.30 24.420±17.12 5.655±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OH CIL_0007OH_0002 UCNEbase 4:96979874-98319114
CIL_0007QX CIL_0007QX_0002 VISTA 4:97077584-97678602

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323770 HNRNPCL2-001 protein_coding Homo_sapiens 0 852
ENST00000336053 HNRNPC-001 protein_coding Homo_sapiens 0 1027
ENST00000399515 HNRNPCP2-001 processed_pseudogene Homo_sapiens 0 1068
ENST00000420743 HNRNPC-006 protein_coding Homo_sapiens 0 652
ENST00000430246 HNRNPC-015 protein_coding Homo_sapiens 0 1123
ENST00000449098 HNRNPC-201 protein_coding Homo_sapiens 0 1110
ENST00000456056 HNRNPCP7-001 processed_pseudogene Homo_sapiens 0 436
ENST00000457130 HNRNPCP10-001 processed_pseudogene Homo_sapiens 0 617
ENST00000525816 HNRNPCP6-001 processed_pseudogene Homo_sapiens 0 765
ENST00000528764 HNRNPCP8-001 unprocessed_pseudogene Homo_sapiens 0 712
ENST00000553300 HNRNPC-002 protein_coding Homo_sapiens 0 1123
ENST00000553444 HNRNPC-032 retained_intron Homo_sapiens 0 379
ENST00000553614 HNRNPC-024 retained_intron Homo_sapiens 0 475
ENST00000553753 HNRNPC-014 protein_coding Homo_sapiens 0 1027
ENST00000554383 HNRNPC-027 protein_coding Homo_sapiens 0 1005
ENST00000554417 HNRNPC-025 retained_intron Homo_sapiens 0 435
ENST00000554455 HNRNPC-005 protein_coding Homo_sapiens 0 652
ENST00000554539 HNRNPC-021 protein_coding Homo_sapiens 0 660
ENST00000554891 HNRNPC-030 protein_coding Homo_sapiens 0 566
ENST00000554969 HNRNPC-017 protein_coding Homo_sapiens 0 1123
ENST00000555137 HNRNPC-033 protein_coding Homo_sapiens 0 475
ENST00000555176 HNRNPC-034 protein_coding Homo_sapiens 0 529
ENST00000555215 HNRNPC-028 protein_coding Homo_sapiens 0 475
ENST00000555309 HNRNPC-010 protein_coding Homo_sapiens 0 634
ENST00000555585 HNRNPC-031 retained_intron Homo_sapiens 0 414
ENST00000555883 HNRNPC-016 protein_coding Homo_sapiens 0 619
ENST00000555914 HNRNPC-011 protein_coding Homo_sapiens 0 1105
ENST00000556142 HNRNPC-020 protein_coding Homo_sapiens 0 475
ENST00000556226 HNRNPC-035 protein_coding Homo_sapiens 0 542
ENST00000556513 HNRNPC-018 protein_coding Homo_sapiens 0 475
ENST00000556628 HNRNPC-022 protein_coding Homo_sapiens 0 652
ENST00000556897 HNRNPC-019 protein_coding Homo_sapiens 0 1123
ENST00000557157 HNRNPC-037 protein_coding Homo_sapiens 0 787
ENST00000557201 HNRNPC-007 protein_coding Homo_sapiens 0 652
ENST00000557336 HNRNPC-029 protein_coding Homo_sapiens 0 268
ENST00000557442 HNRNPC-008 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000557768 HNRNPC-036 protein_coding Homo_sapiens 0 226
ENST00000560385 HNRNPCP3-001 processed_pseudogene Homo_sapiens 0 889
ENST00000571636 HNRNPCP4-001 processed_pseudogene Homo_sapiens 0 486
ENST00000613240 CR854858.1-201 protein_coding Homo_sapiens 0 852
ENST00000617807 CH17-409J4.1-001 protein_coding Homo_sapiens 0 857
ENST00000619361 HNRNPCL2-201 protein_coding Homo_sapiens 0 846
ENST00000621994 HNRNPCL2-001 protein_coding Homo_sapiens 0 852

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