C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | major histocompatibility complex, class II, DM alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000456800  |
HLA-DMA-006 |
ENSG00000204257 |
9606 | - |
6:32949271-32952461  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001PK | CIL_0001PK_0004 | CGP | 6:32934629-32953122 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0002504 | IEA | antigen processing and presentation of peptide or polysaccharide antigen via MHC class II |
| GO:0005515 | IEA | protein binding |
| GO:0006955 | IEA | immune response |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0019882 | IEA | antigen processing and presentation |
| GO:0042613 | IEA | MHC class II protein complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000042121
|
H2-DMa-001 | protein_coding | Mus_musculus | 0 | 540 |
|
ENSMUST00000173907
|
H2-DMa-002 | retained_intron | Mus_musculus | 0 | 427 |
