C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457472 RP11-172F4.2-001 ENSG00000238251 9606 + 9:96407284-96407797 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLungTestisENST00000457472
Transcript ID Adipose Breast Lung Testis
ENST00000457472 0.023±0.00 0.070±0.00 0.618±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z5 CIL_0008Z5_0001 VISTA 9:96215463-96816013
CIL_0007HD CIL_0007HD_0002 CGP 9:96320706-96418329
CIL_0002J9 CIL_0002J9_0001 CGP 9:96385941-96491336

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121139 Gm15596-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000120534 Gm12599-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000121488 Gm6451-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000119424 Gm13333-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000120785 Nsa2-ps2-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000121453 Gm7599-001 processed_pseudogene Mus_musculus 0 374

Loading