C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15596
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121139 Gm15596-001 ENSMUSG00000082289 10090 - 6:18156337-18157120 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000121139
Transcript ID Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000121139 0.062±0.03 0.045±0.03 0.196±0.00 0.147±0.00 0.158±0.00 0.067±0.06 0.042±0.00 0.677±0.42 0.098±0.07 0.355±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063R CIL_00063R_0003 CGP 6:18050964-18322768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296802 NSA2-201 protein_coding Homo_sapiens 0 628
ENST00000440229 AC092641.2-001 processed_pseudogene Homo_sapiens 0 628
ENST00000447373 LL0XNC01-131B10.2-001 processed_pseudogene Homo_sapiens 0 793
ENST00000451818 RP11-90O23.1-001 processed_pseudogene Homo_sapiens 0 664
ENST00000457472 RP11-172F4.2-001 processed_pseudogene Homo_sapiens 0 542
ENST00000511141 RP11-529H22.1-001 processed_pseudogene Homo_sapiens 0 689
ENST00000513356 NSA2-004 processed_transcript Homo_sapiens 0 627
ENST00000514918 NSA2-002 retained_intron Homo_sapiens 0 401
ENST00000515524 NSA2-003 protein_coding Homo_sapiens 0 287
ENST00000551218 RP11-778J16.2-001 processed_pseudogene Homo_sapiens 0 773
ENST00000610426 NSA2-001 protein_coding Homo_sapiens 0 904

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