C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12599
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120534 Gm12599-001 ENSMUSG00000081325 10090 + 11:11436984-11437775 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120534
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120534 0.072±0.00 0.068±0.02 0.073±0.01 0.215±0.00 0.074±0.00 0.054±0.03 0.105±0.00 0.040±0.01 0.030±0.00 0.044±0.01 0.222±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LI CIL_0006LI_0002 CGP 11:11114223-11462408
CIL_0008XP CIL_0008XP_0002 VISTA 11:11227967-11828770
CIL_0006LF CIL_0006LF_0002 CGP 11:11279626-11515192
CIL_0008P3 CIL_0008P3_0002 VISTA 11:11375621-11977027
CIL_0008XT CIL_0008XT_0002 VISTA 11:11399170-12000205

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296802 NSA2-201 protein_coding Homo_sapiens 0 597
ENST00000440229 AC092641.2-001 processed_pseudogene Homo_sapiens 0 558
ENST00000447373 LL0XNC01-131B10.2-001 processed_pseudogene Homo_sapiens 0 750
ENST00000457472 RP11-172F4.2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000511141 RP11-529H22.1-001 processed_pseudogene Homo_sapiens 0 630
ENST00000513356 NSA2-004 processed_transcript Homo_sapiens 0 595
ENST00000515524 NSA2-003 protein_coding Homo_sapiens 0 292
ENST00000551218 RP11-778J16.2-001 processed_pseudogene Homo_sapiens 0 730
ENST00000610426 NSA2-001 protein_coding Homo_sapiens 0 856

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