C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457828 LSS-201 ENSG00000160285 9606 - 21:46189124-46228824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000457828
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000457828 14.848±0.00 7.366±0.00 0.178±0.00 12.156±10.33 15.606±14.65 6.258±4.59 7.798±0.00 7.149±3.64 8.472±7.30 5.439±4.91 5.911±4.41 30.246±11.61 8.690±3.24 15.325±4.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000250 IEA lanosterol synthase activity
GO:0003824 IEA catalytic activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005811 IDA lipid particle
GO:0006695 IMP cholesterol biosynthetic process
GO:0008202 TAS steroid metabolic process
GO:0016020 IDA membrane
GO:0016866 IEA intramolecular transferase activity
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048678 Lss-001 protein_coding Mus_musculus 0 1982
ENSMUST00000160671 Lss-002 retained_intron Mus_musculus 0 1567
ENSMUST00000162475 Lss-003 retained_intron Mus_musculus 0 1127
ENSMUST00000159172 Lss-006 retained_intron Mus_musculus 0 292
ENSMUST00000162282 Lss-008 retained_intron Mus_musculus 8.40779e-45 187
ENSMUST00000162848 Lss-004 retained_intron Mus_musculus 8.40779e-45 187

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