C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | interferon regulatory factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000458069  |
IRF1-010 |
ENSG00000125347 |
9606 | - |
5:132486341-132490304  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00093D | CIL_00093D_0001 | VISTA | 5:131965137-132566411 |
| CIL_0007RF | CIL_0007RF_0001 | VISTA | 5:131967147-132570227 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000975 | IEA | regulatory region DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000019043
|
Irf1-002 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000108922
|
Irf1-008 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000108920
|
Irf1-001 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000123376
|
Irf1-005 | protein_coding | Mus_musculus | 0 | 651 |
|
ENSMUST00000140866
|
Irf1-010 | protein_coding | Mus_musculus | 0 | 649 |
|
ENSMUST00000133291
|
Irf1-006 | protein_coding | Mus_musculus | 0 | 555 |
|
ENSMUST00000138913
|
Irf1-007 | protein_coding | Mus_musculus | 0 | 287 |
|
ENSMUST00000170390
|
Gm17334-201 | protein_coding | Mus_musculus | 2e-35 | 154 |
|
ENSMUST00000142221
|
Irf1-009 | nonsense_mediated_decay | Mus_musculus | 5e-30 | 135 |
