C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeobox D3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000459979 HOXD3-003 ENSG00000128652 9606 + 2:176136612-176139663 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverLungMuscleOvaryPlacentaENST00000459979
Transcript ID Adipose Colon Liver Lung Muscle Ovary Placenta
ENST00000459979 1.590±0.00 2.144±0.00 0.464±0.00 0.295±0.00 0.423±0.24 0.837±0.00 0.288±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_00017M CIL_00017M_0001 CGP 2:176129694-176173102

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144040 Hoxd4-002 processed_transcript Mus_musculus 9e-24 115
ENSMUST00000111983 Hoxd3-001 protein_coding Mus_musculus 9e-24 115

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