C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS p21 protein activator 4CD, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460726 RASA4DP-001 ENSG00000233297 9606 - 7:102681836-102690469 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000460726
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000460726 0.080±0.00 0.351±0.00 0.126±0.00 0.223±0.00 0.034±0.00 0.061±0.00 0.087±0.00 0.212±0.00 0.066±0.00 0.826±0.61 0.337±0.31 0.318±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0001 VISTA 7:102540897-103142421

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152723 Rasa4-005 retained_intron Mus_musculus 0 809
ENSMUST00000135344 Rasa4-004 retained_intron Mus_musculus 0 809
ENSMUST00000125048 Rasa4-003 retained_intron Mus_musculus 0 809
ENSMUST00000042135 Rasa4-001 protein_coding Mus_musculus 0 809
ENSMUST00000140972 Rasa4-007 retained_intron Mus_musculus 0 664
ENSMUST00000134509 Rasa4-002 retained_intron Mus_musculus 0 641
ENSMUST00000100570 Rasa4-006 protein_coding Mus_musculus 0 322
ENSMUST00000145294 Rasa4-010 nonsense_mediated_decay Mus_musculus 0 206
ENSMUST00000122887 Rasa4-011 protein_coding Mus_musculus 3e-28 130

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