C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461065 AGAP3-007 ENSG00000133612 9606 + 7:151134425-151144436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000461065
Transcript ID Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000461065 4.636±0.00 6.706±0.00 9.216±0.00 2.776±0.00 3.302±0.00 19.404±0.00 1.602±0.00 13.342±0.00 2.877±0.00 6.177±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0003TG CIL_0003TG_0001 CGP 7:151081080-151144436
CIL_0004EO CIL_0004EO_0001 CGP 7:151085831-151174745

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024123 Agap3-201 protein_coding Mus_musculus 0 1347

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